PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22187.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 344aa    MW: 38357.8 Da    PI: 6.6666
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22187.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.66.8e-062432761654
                 HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 + ++   L++l+ +      +K + a++L++A+eYIk+L
  PIN22187.1 243 LGDRVTALQQLVSPF-----GKTDTASVLQEAIEYIKYL 276
                 555666677777776.....8*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MAEEYQGGVC RGNLWNSSRN LFGLSPCSSN LGSFPLLENT VFPTAISDDY FRRINHDLII  60
DTKTSSHESG RSEENYSQNI LQESEGLNSN MSFCENSYNF IEQQPSNSFP LNPDSYSLLQ  120
TLFDTDFQTT NCSSPPSSLN YHMNSTGFSD SLTKVLPMAK PTLPKQQDCN NTVPFWNANV  180
RASFVPSPVN STKPNFHNFS AKRQNEEAAN LNSKKVRGQP VLKRQRVETP SPLPTFKVRK  240
EKLGDRVTAL QQLVSPFGKT DTASVLQEAI EYIKYLHDQV SALSTPYLQN GSSPLQFADK  300
TKDEGKILDL KSRGLCLVPI SSTFPVAAET TTDFWTPTFG GTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.32e-55bHLH family protein