PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22193.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NF-YC

Protein Properties

Length: 233aa MW: 26081.5 Da PI: 5.2677

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	176.1	3.5e-55	56	159	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q i+++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlr+w+h+eenkrrtl+k+diaaa+trtdifdflvdiv PIN22193.1 56 QLQNFWASQyeeIDQVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 154 89***99888999******************************************************************************** PP NF-YC 97 prdel 101 pr++l PIN22193.1 155 PREDL 159 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MEQQGNGQTP GPPPASAAST QPPQTAGISA SPAQMAQHQL AYQHIHQQQQ QQLQQQLQNF 60 WASQYEEIDQ VTDFKNHSLP LARIKKIMKA DEDVRMISAE APVIFARACE MFILELTLRA 120 WNHTEENKRR TLQKNDIAAA ITRTDIFDFL VDIVPREDLK DEVLASMPRG ALPVGAPTEG 180 LPYYYMQPQP AQPVGAPGMY VGKPVDPALY GQQPRPYMAQ QMWPQQPQPP ADS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	135	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	2e-72	NF-YC family protein