PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22286.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 372aa MW: 41469.9 Da PI: 6.9508

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ ++ +G g+W+t++r g+ R++k+c++rw +yl PIN22286.1 14 RGLWSPEEDEKLINHITTYGHGCWSTVPRLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	51.3	2.6e-16	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg++T++E l++++++ lG++ W+ Ia++++ gRt++++k++w+ PIN22286.1 67 RGNFTPQEAALIIELHRILGNR-WAQIAKHLP-GRTDNEVKNFWN 109 89******************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MTHHTCCNKQ KVKRGLWSPE EDEKLINHIT TYGHGCWSTV PRLAGLQRCG KSCRLRWINY 60 LRPDLKRGNF TPQEAALIIE LHRILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLAHH 120 HHLRNNTNNA SSSDLATTFG SNPSNSCSGT EKLDNNIIPN PQMDHQMIKN GQIERQICIS 180 TPPSLPLEGF DIPLESNQVT NYSLNLALLP SHSIPISSAS GMNSWPIDQI QNQNHDNFIF 240 PFETSAPSVL NFNQEMQAYD QDSAMLDALM PELSEMAKVI EFGVPSSSFM QEQVLDYPHG 300 GLVSGFPSGL DSRYIPQHPN HINNIASLMA SFVLPESGAT FATLPASFLA PLPWFSPSLA 360 NSYVPSAWAP QP

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MTHHTCCNKQ KVKRGLWSPE EDEKLINHIT TYGHGCWSTV PRLAGLQRCG KSCRLRWINY  60
LRPDLKRGNF TPQEAALIIE LHRILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLLAHH  120
HHLRNNTNNA SSSDLATTFG SNPSNSCSGT EKLDNNIIPN PQMDHQMIKN GQIERQICIS  180
TPPSLPLEGF DIPLESNQVT NYSLNLALLP SHSIPISSAS GMNSWPIDQI QNQNHDNFIF  240
PFETSAPSVL NFNQEMQAYD QDSAMLDALM PELSEMAKVI EFGVPSSSFM QEQVLDYPHG  300
GLVSGFPSGL DSRYIPQHPN HINNIASLMA SFVLPESGAT FATLPASFLA PLPWFSPSLA  360
NSYVPSAWAP QP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	2e-74	MYB family protein