PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22312.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 518aa    MW: 57892.7 Da    PI: 6.5143
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS238.92.2e-731385072367
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL  cA a+++++ +++q++L  l++l+s +gd+++Rla++ ++AL + l+  +s+ ++a ++++ +++n +    +l  f+++ P++++ + +aN 
  PIN22312.1 138 EQLLNPCAAAIAARNPSRVQHFLYVLHDLSSLKGDANHRLAFHGLRALTHYLSAGGSNFSSATSSNTFASSNPKFFRDSLIKFNDINPWFRIPNNVANT 236
                 689***************************************************************9999888888888888***************** PP

        GRAS 101 aIleavege...ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.......skeeleetgerLakfAeelgvpfefnvlvakrled 188
                  Il+ ++++   + +Hi+D+++s+G++Wp+Ll++L+ R+ ++pp +R+T+v++pe++       +  +     ++L  fA+ +++++++n +   +l++
  PIN22312.1 237 SILQILAEQsqpRDLHIVDIGVSHGVHWPTLLEELTRRAgGPPPLVRLTVVAPPEQSrtavpfaNGPSNYDFSSKLLTFAKDMNINLQINRIENFQLQN 335
                 *****9999888899************************55666**********9999999999999999*********************7666**** PP

        GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh...nsesFlerflealeyysalfdsleaklpreseerik 284
                 l+ + ++ +++E+l+++ ++ lh+l    ++++++r+e+L+++++l+Pk v+++e+++d+   n  +F+++f++ +ey + ++ds+++ +    + r +
  PIN22312.1 336 LNSQVINSSTEETLIICAQFTLHNLN---HTSPDHRTEFLQVLRTLQPKGVILSENNTDCscnNCCDFATGFSRRVEYLWRFLDSTSVAY----KGRES 427
                 *************************8...77777889*******************96653355669*******************8775....55555 PP

        GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpL 367
                  Er +++ e+ +v+ + g++    +e++ekW er++ aGFk   ++e++ + ak+llrk++ +++ +vee++g++ l Wk++pL
  PIN22312.1 428 DERSMMEAEAAKVLINVGEM----NESKEKWCERMKVAGFKGEIFGEETIDGAKALLRKYDsNWEVKVEEKDGCFGLWWKGQPL 507
                 55555556699999999999....9999*********************************9999*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    
MTIDDSESNP PSDHILGWLG DSISYFPTFF DDPYDGGDFS GDSWWVQTQE LDQELINLSP  60
NSFTTTSAAP TPNDSILSNQ SIPLDSTKKR KSPDESSPKI TQKNTKEQGV APRKSTANKK  120
GNNKSAANSN NKEGRWAEQL LNPCAAAIAA RNPSRVQHFL YVLHDLSSLK GDANHRLAFH  180
GLRALTHYLS AGGSNFSSAT SSNTFASSNP KFFRDSLIKF NDINPWFRIP NNVANTSILQ  240
ILAEQSQPRD LHIVDIGVSH GVHWPTLLEE LTRRAGGPPP LVRLTVVAPP EQSRTAVPFA  300
NGPSNYDFSS KLLTFAKDMN INLQINRIEN FQLQNLNSQV INSSTEETLI ICAQFTLHNL  360
NHTSPDHRTE FLQVLRTLQP KGVILSENNT DCSCNNCCDF ATGFSRRVEY LWRFLDSTSV  420
AYKGRESDER SMMEAEAAKV LINVGEMNES KEKWCERMKV AGFKGEIFGE ETIDGAKALL  480
RKYDSNWEVK VEEKDGCFGL WWKGQPLDPS FLAKPKQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-136GRAS family protein