PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22343.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 222aa    MW: 24640.6 Da    PI: 5.114
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22343.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-1961111155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y GVr +k +grWv+eIr+p   gk++r++lg+f+t+e+Aa+a++ a++ ++g
  PIN22343.1  61 SQYVGVRKRK-WGRWVSEIREP---GKKTRIWLGSFDTPEMAAAAYDVAALHFRG 111
                 78*****999.**********8...557***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MSVPSCCNTT SIHFHATTWK LPSNNTHGTL YKYYQLELSF PLQNTPKTNM KKQGCNECST  60
SQYVGVRKRK WGRWVSEIRE PGKKTRIWLG SFDTPEMAAA AYDVAALHFR GADARLNFPG  120
LVDRLPKPAS SNPEDIRQAA QDAAMMLRSD QPSEVATGSR GGTGPARVEL SPSDIQAINE  180
SPLDSPKMWM ELAGPSAVGE PVDLGESEMD EWDEMDSYPI WD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-48ERF family protein