PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22348.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 341aa MW: 37705.4 Da PI: 5.0065

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.3e-12	171	218	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ + f L +++P + kKl+Ka+ Le A++Y+k Lq PIN22348.1 171 QDHLMAERKRREKLAQLFISLSKVVPGL-----KKLDKASLLEDAINYVKALQ 218 56999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MEEMNLEEMF DFGPTILSEI YTSQLQPQIT SDNHAISRKA NNIIKHQLIT SSKSWINSSS 60 PQEIISCNNP SSSSTASASA SASASASAAQ LISFESLNTS SQLPANSDTA HNYNSNVLEM 120 DKDYNSITPQ IINFSSNYDS SGDYDEYNDA VINGISQKRV CAASRTPSQA QDHLMAERKR 180 REKLAQLFIS LSKVVPGLKK LDKASLLEDA INYVKALQER VSVLEEEEMI KKSSMEEESS 240 NINYDNLGST GQTGSPEIKA RISNRNVLIK ICCKKEMGLM SRIPSEMEKM HLSVVDMRFM 300 PFGGTALDIT ILAEMHNEFR GTVKDIVDHL QMVFAEPASG H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	182	ERKRRE
2	178	183	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-39	bHLH family protein