PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22368.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 218aa MW: 25029.9 Da PI: 10.0853

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	72.8	5.1e-23	43	87	2	46
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46 prl+Wt++LH++F++av++LGG+++AtPk +lelm+vkgLt++h+ PIN22368.1 43 PRLKWTHDLHQCFISAVDRLGGEDRATPKMVLELMNVKGLTITHM 87 8*****************************************996 PP
2	Myb_DNA-binding	30.5	8.5e-10	44	86	1	39
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkq 39 r++WT ++++ ++ av +lGg+ t+k + + m+ kg+t + PIN22368.1 44 RLKWTHDLHQCFISAVDRLGGEdraTPKMVLELMNvKGLTITH 86 89*************************************9766 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MNSTERPEFS GRVHRRQVAE SKPLPPTTTA KSGVRPYIRS KVPRLKWTHD LHQCFISAVD 60 RLGGEDRATP KMVLELMNVK GLTITHMYRS MKHEEMIQAL ETKQSSHFGL ISGLSQIKGL 120 FSIWQEVKLK PMESERISRL YRPEVLEFGC ARRFNCRAIF KDFFRGCNQD DFITSSKDKQ 180 VLIRDMNSGN KPLWMESKVL AQRASVDADD VSLELTLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	2e-24	G2-like family protein