PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22370.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 534aa MW: 57713.6 Da PI: 6.7199

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.8	1.4e-30	289	347	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed ++++tYeg+Hnh+ PIN22370.1 289 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRAILITTYEGTHNHP 347 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MEKGGGLAIE KSDPVGFFWN KSGLGFSLTS PRLNHRNNDL MTFPVNSIGK EEQPTAAAGG 60 EPPPVVLGEV DFFSEKKRPV EEVNDVVKKE MINSLDVNTG LQLLTSNTGS DQPTVVNGSS 120 SGDRRAKIEV EQLQVELGRM NVENQRLKEM LTQVSNNYTS LQMQFATMMQ QHQNSRTEVI 180 DRKFEENKQE NGEVVVPRQF LDLSTGGGAD EHSNLSSEER TISGPPQENV ELSGNKRGIG 240 RDGSPESEGW GANKAPKLSP PRPADQSNEA TMRKARVSVR ARSEAPMISD GCQWRKYGQK 300 MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA EDRAILITTY EGTHNHPLPP AAMAMASTTS 360 AAANMLLSGS MPSADGLMNP NFLARTVLPC SSTMATISAS APFPTITLDL TQNPNPNSNP 420 FQFQRPATHF QVPFAPVPNP SIPQVFGQAP YNQSKFSGLQ MSQDLNESGQ HIPPSLADAL 480 TAATAAITTD PNFTAALAAA ISSIIGSSHQ NNNSNPNVNT SDSKKISSNF PNVQ

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MEKGGGLAIE KSDPVGFFWN KSGLGFSLTS PRLNHRNNDL MTFPVNSIGK EEQPTAAAGG  60
EPPPVVLGEV DFFSEKKRPV EEVNDVVKKE MINSLDVNTG LQLLTSNTGS DQPTVVNGSS  120
SGDRRAKIEV EQLQVELGRM NVENQRLKEM LTQVSNNYTS LQMQFATMMQ QHQNSRTEVI  180
DRKFEENKQE NGEVVVPRQF LDLSTGGGAD EHSNLSSEER TISGPPQENV ELSGNKRGIG  240
RDGSPESEGW GANKAPKLSP PRPADQSNEA TMRKARVSVR ARSEAPMISD GCQWRKYGQK  300
MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA EDRAILITTY EGTHNHPLPP AAMAMASTTS  360
AAANMLLSGS MPSADGLMNP NFLARTVLPC SSTMATISAS APFPTITLDL TQNPNPNSNP  420
FQFQRPATHF QVPFAPVPNP SIPQVFGQAP YNQSKFSGLQ MSQDLNESGQ HIPPSLADAL  480
TAATAAITTD PNFTAALAAA ISSIIGSSHQ NNNSNPNVNT SDSKKISSNF PNVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-126	WRKY family protein