PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22459.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 255aa MW: 27275.5 Da PI: 8.768

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	9.7e-18	15	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W ++Ed l+++v+++G+++W++I++ ++ gR++k+c++rw + PIN22459.1 15 KGSWNPQEDAALIKLVEEHGPRNWSLISSGIP-GRSGKSCRLRWCNQ 60 799***************************.*********985 PP
2	Myb_DNA-binding	46.9	6.4e-15	69	111	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed +++ ++ +G++ W+tIar ++ gRt++ +k++w++ PIN22459.1 69 PFTAAEDAMILREHAIHGNR-WATIARQLP-GRTDNAIKNHWNST 111 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MAESHGGSGG GGKIKGSWNP QEDAALIKLV EEHGPRNWSL ISSGIPGRSG KSCRLRWCNQ 60 LSPTVQHRPF TAAEDAMILR EHAIHGNRWA TIARQLPGRT DNAIKNHWNS TLRRRRNFCG 120 GGGGVAGRRR SSEESGSGSS EKRQCSRASQ EQSSYSGDEN GSGGDGLTLT LLPPGGGVMQ 180 LHAGEEEVKE KEELQMIRGE GGGDLTVGIG DTCLVTVIQR MIAQEVRKYF EKLRAQGGLG 240 LGIGPGLEAV VQKDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	8e-47	MYB family protein