PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22547.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

LBD

Protein Properties

Length: 263aa MW: 29061 Da PI: 5.4144

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22547.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	90.6	1.9e-28	4	107	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C+vlr++C+++C+l+p++ p++q++++ +++k++G++ +++ll++ p++ ++++++sl+yeA+ r+ +Pv+G+vg++ ++ + +q+++e+ PIN22547.1 4 SCNGCRVLRKGCTQNCTLRPCLqwiksPESQANATLFLAKFYGRAGLINLLNTSPTNLQPEIFRSLLYEACGRIINPVHGSVGLMCSGDWPRCQAAVEA 102 6*************************************************************************************************9 PP DUF260 95 allke 99 +l+++ PIN22547.1 103 VLQGT 107 98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MRMSCNGCRV LRKGCTQNCT LRPCLQWIKS PESQANATLF LAKFYGRAGL INLLNTSPTN 60 LQPEIFRSLL YEACGRIINP VHGSVGLMCS GDWPRCQAAV EAVLQGTPLM MQVAGDDDSS 120 TVAPTEYPIT PLQGCDIRHL SRDSAASANR IRTRNRFKRS ALRANSVATE LMSESEEKFT 180 ITGWDYGEDH KNFSEELKRA PSHDSFSVET VEPALANPVE NLVRGVKPEP EPCEIELDLT 240 LGLNPLLLKN YISSVIEISD SET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02550.1	2e-66	LBD family protein