PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22553.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 219aa    MW: 25048.3 Da    PI: 8.1889
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22553.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.95.7e-1481128354
         AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                 y GVr +k +gr+ AeIrd +     +k+ +lg+f t+eeA +a+i  ++++e
  PIN22553.1  81 YVGVRMRK-SGRFGAEIRDpF----LKKKLWLGTFTTPEEASRAYISKKREFE 128
                 89*****9.7*********44....25********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MKKLTPKTRI VKISYSDPDA TDSSSDELNF NPTCKRSKKI THKIFIQGGK ILENKKHHAF  60
VPQIAPQNIL NPSKKTIKNY YVGVRMRKSG RFGAEIRDPF LKKKLWLGTF TTPEEASRAY  120
ISKKREFEEK RKELRGSGRD LPHSNPFLEN EPSDLYEEKV DSNDVTEVDV KDMVSGDEEA  180
EFGYLNDAQV IDNYGRFVGE FSKIDDMSIP STEDGVFLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13578KRSKKITHKIFIQGGKILENKKHHAFVPQIAPQNILNPSKKTIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-15ERF family protein