PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22792.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 340aa MW: 37578.4 Da PI: 9.938

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64.1	3.2e-20	43	134	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqlea 87 +W+ +e+ aLi+a+re++ +lrrg+l++++W+ev++ + ++++qC++k+e+l+kry+ + +++ + + +s++++f++++a PIN22792.1 43 CWSPDETAALIDAYREKWYSLRRGNLRANHWQEVADDVasrCPASPPKTAVQCRHKMEKLRKRYRSEIQRAAAHggVRRFTSSWVHFQSMHA 134 7***********************************5432234489***************999988855699999******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MATILSPSSA SPHDDDNIPT ATLALPSIAT ASASSSRRLP PPCWSPDETA ALIDAYREKW 60 YSLRRGNLRA NHWQEVADDV ASRCPASPPK TAVQCRHKME KLRKRYRSEI QRAAAHGGVR 120 RFTSSWVHFQ SMHAMERGPN PTPPSSDDEE EDDHKNSIKR INDLYNYNQK GVFGSQGPEN 180 NGAISGVRIK IPGRAPAGPS VAKVYSKFDE FGSQNPNIPN PRFANSIPVV NGAASSKVLR 240 DGFAGRAEMG KRIGDMSKKN KADDGVGEVV AAIQALGEGF MRIEKVKMDM ARQVEEMRME 300 MELKRTEMIL ESQQRIVEAF AKAISERSSK RAKRNSTPDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	3e-63	Trihelix family protein