PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22795.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 225aa    MW: 25586.3 Da    PI: 8.0778
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.41.2e-32149207159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+
  PIN22795.1 149 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHS 207
                 59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MEGEKGFPPI YDNNHLPISF STPEMGFLQF EDHNQVLSFL AAAQQPIDGG ATPSAAKPTT  60
TGSEKGSLGF NHNEILSRPS WNNDLQAAAI DPKNTNGENC SGNINEGAHN SWWRNSSSMS  120
SDKMSKMKVR RRLREPRFCF QTRSDIDVLD DGYKWRKYGQ KVVKNSLHPR SYYRCTHSNC  180
RVKKRVERLS EDCRMVITTY EGRHNHSPCE DSNSSEQHDS CFTSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128134KVRRRLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.13e-62WRKY family protein