PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22923.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 463aa MW: 50583 Da PI: 6.6139

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.7	9.9e-24	178	221	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrC+RtDGKkWRCsr+v + +k+CErHlhrgr rsrk++e PIN22923.1 178 DPEPGRCKRTDGKKWRCSRDVAPHQKYCERHLHRGRPRSRKPVE 221 79***************************************998 PP
2	QLQ	50.1	8.3e-18	126	158	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FT aQ+ +L++Q+++yKy+++++PvP +Ll++ PIN22923.1 126 PFTSAQWKELERQAMIYKYMISSVPVPRDLLFP 158 8*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MEKGAKSGSG FSISEKKSSS SDSDVSLMNF HTTEPFPSKI FTMGIHHQKT NLDRPFDGGG 60 TAAGTGAEDG WLDPTGSNSG GANEVVGNIH REDVSSSDPL PFDTFAASCS STPYKSPGMA 120 QNMGFPFTSA QWKELERQAM IYKYMISSVP VPRDLLFPRN FDSAATSLYN SRYSKNGDPE 180 PGRCKRTDGK KWRCSRDVAP HQKYCERHLH RGRPRSRKPV EVKNNGENHK KTRLEQSPLP 240 NYAVSQANNQ PLLLFNAKSD LSISTPPSYK ESHRDLSLMI DGHLANMGFS NEGSSIYAYN 300 ALFHQDYMEQ PPLNLLNYAS TTGFIDAWSI DNLNSTNNNG DNSESSLSMN HGNLSPSLNL 360 SIAMAAGDII DEEMRKIQMG SGEEQITENL SPISWEPFAR GGPLAEVLQP TNPASPISTP 420 ATTVSSPSGV LHRTLFSHSD SSVCNSPTFG APPSEVAFHH RLN

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MEKGAKSGSG FSISEKKSSS SDSDVSLMNF HTTEPFPSKI FTMGIHHQKT NLDRPFDGGG  60
TAAGTGAEDG WLDPTGSNSG GANEVVGNIH REDVSSSDPL PFDTFAASCS STPYKSPGMA  120
QNMGFPFTSA QWKELERQAM IYKYMISSVP VPRDLLFPRN FDSAATSLYN SRYSKNGDPE  180
PGRCKRTDGK KWRCSRDVAP HQKYCERHLH RGRPRSRKPV EVKNNGENHK KTRLEQSPLP  240
NYAVSQANNQ PLLLFNAKSD LSISTPPSYK ESHRDLSLMI DGHLANMGFS NEGSSIYAYN  300
ALFHQDYMEQ PPLNLLNYAS TTGFIDAWSI DNLNSTNNNG DNSESSLSMN HGNLSPSLNL  360
SIAMAAGDII DEEMRKIQMG SGEEQITENL SPISWEPFAR GGPLAEVLQP TNPASPISTP  420
ATTVSSPSGV LHRTLFSHSD SSVCNSPTFG APPSEVAFHH RLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	7e-42	GRF family protein