PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22932.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 210aa    MW: 25005 Da    PI: 6.5383
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox597.6e-192576556
                SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                ++f++eq++ Le+ F+ ++++  +++ +LA++lgL+ rqV +WFqN+Ra++k
  PIN22932.1 25 RRFSDEQIKSLESIFKVENKLEPRKKLQLARELGLQPRQVAIWFQNKRARWK 76
                68*************************************************9 PP
2HD-ZIP_I/II117.66.7e-3824114393
  HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                   rr+s+eq+k+LE+ F+ e+kLep++K +lareLglqprqva+WFqn+RAR+k+kqlE++y+ L+++y+ l  + + L++e ++L+ el++
   PIN22932.1  24 ARRFSDEQIKSLESIFKVENKLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLEQEYRILRENYEDLYMKFDDLKRERQSLQMELQK 114
                  69************************************************************************************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MESPTKQSPQ KIDEKQSKNK AKNARRFSDE QIKSLESIFK VENKLEPRKK LQLARELGLQ  60
PRQVAIWFQN KRARWKSKQL EQEYRILREN YEDLYMKFDD LKRERQSLQM ELQKLSDLEK  120
NLHNANLIDQ NSKFEEYPKI SHEEMDHNYV IRAENEQKIT NCFEKTQEQE VLSWGEQEGE  180
ISHLASPENW CNFPSGGLLS GSSSWWGVNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.17e-44HD-ZIP family protein