PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22958.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 279aa    MW: 30785.8 Da    PI: 5.9606
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.27e-12556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+eE+e l  +v+++G g Wk I r          R+  ++k++w+++
       PIN22958.1  5 KQKWTAEEEEALRAGVAKHGAGKWKNIQRDPEfnhflFARSNIDLKDKWRNL 56
                     79*******************************9**977***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MGNPKQKWTA EEEEALRAGV AKHGAGKWKN IQRDPEFNHF LFARSNIDLK DKWRNLSVAN  60
GQGPREKSKT PKAKGNPADT AATPLPIAKT SALVTPSSQD ASTDVVMLDS SKPLLEENNV  120
SKYNAFIYEA LSTLDEPNGS DCSSIANFIE PRYEVPQNFK RVLTSRLSRL VQQDKLEKVQ  180
KCYKLKEGAV LDTKSPAARQ KDAQPRPVQI IGYIGDTVEE AAVSAAYKIA EAENKSFVAA  240
ESVKEAERVS TMAEQMESLL QFAIDCFEQT AYGDILLMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.21e-66MYB_related family protein