PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23302.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 288aa MW: 32160.8 Da PI: 6.8964

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	107.8	1.6e-33	29	114	3	88
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 g+kdrhsk++T++g RdRRvRls +a++f+d+qd+LG+d++sk+i+WL+++ak+ai++l++ + +a++++++++ +++s +++ PIN23302.1 29 GRKDRHSKVCTARGTRDRRVRLSPRTAIQFYDVQDRLGYDRPSKAIDWLMKEAKAAIDALNKPPPLDATNVTENQHMQQESGRGIT 114 79************************************************************955555444333333333322222 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MDIPPKLKAT RRKADIIEVH GGRIIRSGGR KDRHSKVCTA RGTRDRRVRL SPRTAIQFYD 60 VQDRLGYDRP SKAIDWLMKE AKAAIDALNK PPPLDATNVT ENQHMQQESG RGITQNLENL 120 NNDNPSSSFG FLSNGPDFQA YPSDDFSLSI SRSEAPDDSV PYPNYNHEGF FSAPLTTTSE 180 IFDLEMARLQ RIFTWNYANA RGAGEDYSSV HSLPLNFPAV SPVLGHGQMF SQREPLQSRI 240 TGFSPITSQF PGISFSSDEL PNFTTAASLK ENEMEKVAAS TAFLHYEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-37	TCP family protein