PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23362.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 389aa MW: 41553.1 Da PI: 9.7369

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.5	2.8e-39	93	207	4	89
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............. 88 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLl qa+pai+++tgt++++a+++ ++s +ss+ + s++ PIN23362.1 93 VKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLHQAEPAIIAATGTGTIPANFStLNVSLRSSGITISAPpsksaplfiggas 191 5899***************************************************************99977777777766444445555566666666 PP TCP 89 ...............k 89 PIN23362.1 192 gmlgfhhqltsstsfG 207 6666643333333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MQFMEPLTKN QGSSGNNSGH HEAASSLQLL SPHPHHHHSQ PEPSSGSGPV PPHGPVMGSI 60 SMQQSRTLAV SSTSSTPTTT TNKDTNKNDS NAVKKPSKDR HTKVDGRGRR IRMPALCAAR 120 VFQLTRELGH KSDGETIEWL LHQAEPAIIA ATGTGTIPAN FSTLNVSLRS SGITISAPPS 180 KSAPLFIGGA SGMLGFHHQL TSSTSFGQDP DENYMRKRFR EDTTGAKSPK SGRSSVQDQE 240 QGTDPKPGSS QASSFIPGPA MWAVAPAAAN MANAFWMLPV TGGAATATVG QQEWQYRTAP 300 MQRIGGFEFS GAGRFNPVQL GSMVMQQPRP PVQQLGLSVS ESNIGMLASM NAYNSSNSRI 360 DLGMNLEHNH HQNQQQNSDS SDENPKDSK

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MQFMEPLTKN QGSSGNNSGH HEAASSLQLL SPHPHHHHSQ PEPSSGSGPV PPHGPVMGSI  60
SMQQSRTLAV SSTSSTPTTT TNKDTNKNDS NAVKKPSKDR HTKVDGRGRR IRMPALCAAR  120
VFQLTRELGH KSDGETIEWL LHQAEPAIIA ATGTGTIPAN FSTLNVSLRS SGITISAPPS  180
KSAPLFIGGA SGMLGFHHQL TSSTSFGQDP DENYMRKRFR EDTTGAKSPK SGRSSVQDQE  240
QGTDPKPGSS QASSFIPGPA MWAVAPAAAN MANAFWMLPV TGGAATATVG QQEWQYRTAP  300
MQRIGGFEFS GAGRFNPVQL GSMVMQQPRP PVQQLGLSVS ESNIGMLASM NAYNSSNSRI  360
DLGMNLEHNH HQNQQQNSDS SDENPKDSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	9e-61	TCP family protein