PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23437.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 312aa    MW: 34867.6 Da    PI: 6.235
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23437.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.33.2e-33168225259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+
  PIN23437.1 168 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCAVKKRVERSFQDPSTVITTYEGQHNHH 225
                 8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MSEEFTGFYY HQPFHDDLRR STAAANFPYS GSTDQFSDSL QMFDPSPHLS FSEILHGEYN  60
NALSDAFGLS PSTSEAFSFV KEEQVPVMEA VGGGETPATP NSSISTSSTE AAAGGEDCKK  120
SKTEMKETLE DAEDDTSKKE GKAKKKGGKK QKQPRFAFMT KSEVDHLEDG YRWRKYGQKA  180
VKNSPYPRSY YRCTTQKCAV KKRVERSFQD PSTVITTYEG QHNHHVPPTL RGNVAAGMFA  240
SPPLIPFEGS SFPQELFVQM PQDLYSYGGG SASNVYDHQQ PLGTLHHQQF HQFPDYGLLQ  300
DIIPPVFTRQ EP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.15e-62WRKY family protein