PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23459.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 234aa    MW: 25943 Da    PI: 7.0309
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23459.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.62.9e-051842201354
                 HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 R+r+++   +L+ ++P a      ++s +++L +A++Y+ksL
  PIN23459.1 184 RQRMRKMVKTLKGIVPGA-----NRMSTVAVLDEAIRYLKSL 220
                 89999999*********8.....69***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MHNNQPYFPG QPMQPLADQF GYCMQNAPTA SVFNEGIMPS GIKPSIPSHT VDIQPSNACP  60
RNFIIFDQTT NRSQIMFHPE MSSKFFYPGF GADTIWGDGI DRKDANDEVK IASSFKEDSG  120
DIDALLSTED DAEEGDDDEV STARTHAVYE CNSTDSCSNY DSPSGKGRSH FRKSSGSRSN  180
DKKRQRMRKM VKTLKGIVPG ANRMSTVAVL DEAIRYLKSL KVEVRKLGVR ISKG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183188KRQRMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.17e-32bHLH family protein