PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23599.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 238aa    MW: 26635.7 Da    PI: 5.1603
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.71.3e-05185224954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 E++ R+r+++    Lr ++P a      ++s +++L +Av+Y+ksL
  PIN23599.1 185 EKK-RHRMRKMVKALRGIVPGA-----NRMSTVAVLDEAVRYLKSL 224
                 555.6899999**********8.....69***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MHSDEPYFAR KTMLPLGDQV GYYGQNAPMG TFFNGGLVPP GIKPLMPFHN VDIQPSNACP  60
RNFVIFDQTH NKSQIMFHPE IDSKLFSPPF GLDPSIFQVN AGQNTADDER KNSAPFKEDS  120
DDIDALMSTE DEENDECDDD DDEVSTARTD AYYACNSPDS CSNYDLPPRK SQSFFRKSSG  180
SHENEKKRHR MRKMVKALRG IVPGANRMST VAVLDEAVRY LKSLRVEVQK MGVGNAKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.16e-36bHLH family protein