PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23613.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 241aa MW: 26500.9 Da PI: 4.5913

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.2	4.6e-06	186	211	5	30
HHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 5 hnerErrRRdriNsafeeLrellPka 30 h ++Er+RR+++ ++f L +++P + PIN23613.1 186 HIIAERKRREQLSQRFVALSTIVPGL 211 899*********************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MDSSEMSWLS EMGLDNSIFM DQCDFMDSFD EEVAAVLGQD FENCLSAGNN SSSSSTLINI 60 PSTNSINSLC TNSPPTDNNM ASEPPAKLQK PNNFSNFSTV QTLPNPDRAS SAPIILNFGN 120 STEINPQQIV NPSRPLNPDE EAAVSEVLRS QGSFVEPEEQ PKRAPAMTAT TKKTSRVRPP 180 SQTYDHIIAE RKRREQLSQR FVALSTIVPG LKKIIIPLPL NIDLIMKILH AVREIIIIIS 240 S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	195	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22750.1	4e-08	bHLH family protein