PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23653.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WOX

Protein Properties

Length: 356aa MW: 39806.3 Da PI: 6.4326

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.5	4.1e-22	63	122	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ PIN23653.1 63 SRWNPTPEQLQTLEELYRSgTRTPSADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 122 7***************99************************************97 PP
2	Wus_type_Homeobox	117.6	5.5e-38	62	124	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely+sG+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ PIN23653.1 62 SSRWNPTPEQLQTLEELYRSGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 124 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MWMMGYSDSA EFNSNIQDSF NGRKLRPLMP RQATNHLLTL NHHLAMAEQN KRESSTQQVV 60 VSSRWNPTPE QLQTLEELYR SGTRTPSADQ IQHITAQLRR YGKIEGKNVF YWFQNHKARE 120 RQKRRRHLQS SSDQPQPHNG HAQKKYEENA KELPAGVNRP VFEVEETKKW ASPTDSSTIA 180 EKNVSTKGAA KAAADAECKA DGWLQFEDEP ELIQQRRNGT WQMMHLSCSS SSSSSPTNLI 240 NPSSVPTVTT TVPSPVGLAI LEPNLMIKTP DFIDINFVGP TYNINVRNLG NSAVEGGRGG 300 GGGGEAQTLE LFPLGRKEEC EDEEEGEEES GAVIMNGTSS NVTPNYKFFE FLPIKN

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MWMMGYSDSA EFNSNIQDSF NGRKLRPLMP RQATNHLLTL NHHLAMAEQN KRESSTQQVV  60
VSSRWNPTPE QLQTLEELYR SGTRTPSADQ IQHITAQLRR YGKIEGKNVF YWFQNHKARE  120
RQKRRRHLQS SSDQPQPHNG HAQKKYEENA KELPAGVNRP VFEVEETKKW ASPTDSSTIA  180
EKNVSTKGAA KAAADAECKA DGWLQFEDEP ELIQQRRNGT WQMMHLSCSS SSSSSPTNLI  240
NPSSVPTVTT TVPSPVGLAI LEPNLMIKTP DFIDINFVGP TYNINVRNLG NSAVEGGRGG  300
GGGGEAQTLE LFPLGRKEEC EDEEEGEEES GAVIMNGTSS NVTPNYKFFE FLPIKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	304	GGRGGGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	1e-48	WOX family protein