PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23661.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 243aa    MW: 27849.9 Da    PI: 8.3267
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.5e-1368120155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ +h  +Er+RR+++   ++ Lr++lP+      ++K s ++   ++v YIk++q
  PIN23661.1  68 KKIMHRDIERQRRQEMAGLYASLRSVLPPeY---IKGKRSTSDHIDQTVSYIKHMQ 120
                 5789*************************77...*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MFPLQSDRLV LDQDPSFSEQ DKFLEDLLVD CGDHIEGNIE IISDKGVKKR QRRVEKSKDE  60
PQSSSDLKKI MHRDIERQRR QEMAGLYASL RSVLPPEYIK GKRSTSDHID QTVSYIKHMQ  120
KKIDWMQTKR DKLKELLTVR RAATNIADDP TSSSSIDLCN SVKINPCRDG MEILITSSLN  180
REGFPLSKVL KDLVGRGLNV VSCISARSAD EWFLHKVQIE VNDLARINLS ELQERLVNVI  240
KFA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14753VKKRQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-39bHLH family protein