PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23663.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 243aa    MW: 27959.4 Da    PI: 9.8412
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.4e-1068120155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ +h   Er+RR+++   ++ Lr+llP       ++K s  +   +A  YIk++q
  PIN23663.1  68 KKIMHRDTERKRRKEMSGLYASLRSLLPLeY---IKGKRSITDHIYQAESYIKHMQ 120
                 5789*************************77...*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MFPLRSDGLV LNQDPSFSEQ DKFLEDLLAD CGDHVEGNIE VISNKGIRKK QKTVQKSKGE  60
PHSGTELKKI MHRDTERKRR KEMSGLYASL RSLLPLEYIK GKRSITDHIY QAESYIKHMQ  120
KKIERMQTKR DKLKEFSDVQ RVVINIADHP MSSSSIHSCH LVKINPCRDG LEILITTSLN  180
GEGFPLSKVI TELVGRGLNV VSFISTRSVD EWFLYKVQIK VHDLARINLF ELQERLINVI  240
KFA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17782RKRRKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.17e-36bHLH family protein