PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23671.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GeBP

Protein Properties

Length: 345aa MW: 39174.9 Da PI: 6.1955

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	79.9	3.9e-25	45	139	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +f+r+w+e Dei +LqGl+d+ +++ d+ fy +++ +s ++ksql+eK+rrL+kKf+ +++ ++g + s + hd+ ++lsk++W+ PIN23671.1 45 KFHRIWTEPDEIRFLQGLLDCSSQNL-AFPRDLGIFYARFSNTMSQPYTKSQLSEKLRRLRKKFRVISSRLSKGLDRSQLSLHDRALYDLSKQLWH 139 699****************77665.6678**************************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MDSTLTQPNN KPSASKLPVK RKTPDPDPPL DPNRDPIEGR APPFKFHRIW TEPDEIRFLQ 60 GLLDCSSQNL AFPRDLGIFY ARFSNTMSQP YTKSQLSEKL RRLRKKFRVI SSRLSKGLDR 120 SQLSLHDRAL YDLSKQLWHP DYAATSPFNG ARNVGLNHSN NTSGDGDRKM KKSGLIGINV 180 DFSPSLPGFD QKDDVNDVNL ELDCVDHEND VDQGPVAFGD FYDQDNKNED VKLSEVNVEF 240 EREEAAMEDE GNDTLDVGIG AKKVGFEQNI ESGCKRKIGE LVVKVVMNVF DDCFKDVRRR 300 LIAGLGGESV GAESYRMRWQ RQRVEELDVL GSRVRFFLDN SLHKH

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MDSTLTQPNN KPSASKLPVK RKTPDPDPPL DPNRDPIEGR APPFKFHRIW TEPDEIRFLQ  60
GLLDCSSQNL AFPRDLGIFY ARFSNTMSQP YTKSQLSEKL RRLRKKFRVI SSRLSKGLDR  120
SQLSLHDRAL YDLSKQLWHP DYAATSPFNG ARNVGLNHSN NTSGDGDRKM KKSGLIGINV  180
DFSPSLPGFD QKDDVNDVNL ELDCVDHEND VDQGPVAFGD FYDQDNKNED VKLSEVNVEF  240
EREEAAMEDE GNDTLDVGIG AKKVGFEQNI ESGCKRKIGE LVVKVVMNVF DDCFKDVRRR  300
LIAGLGGESV GAESYRMRWQ RQRVEELDVL GSRVRFFLDN SLHKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-17	GeBP family protein