PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23674.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 535aa    MW: 58120.9 Da    PI: 5.0585
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS453.41.4e-1381665301374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv++L++cAeav++++++la+al++++  la ++  +m+++a+yf+eALa+++++    +y    p+++ e++ s++l++   f+e+ P+lkf+h+taN
  PIN23674.1 166 LVHTLMACAEAVQQDNMKLADALVKHIGILAVSQVGAMRKVATYFAEALARKIYK----IY----PQDALETSYSDVLQM--HFYETAPYLKFAHFTAN 254
                 689***************************************************9....44....555554455666555..4**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea+ g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La+fAe++gv+fef+ +va++l+ ++ ++L++ p
  PIN23674.1 255 QAILEAFGGANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQADNSDALQQVGWKLAQFAETIGVEFEFRGFVASSLAHIDAKMLETGP 353
                 **************************************************************************************************9 PP

        GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpres.eerikvErellgre 293
                    Ea+aVn+v++lh ll+ ++ +e+    vL+ +k+++Pk+v++veqea+hn++ Flerf eal+yys++fdsl ++++ + +  e+ ++ +++lgr+
  PIN23674.1 354 gnSEAVAVNSVFELHCLLSMPGGIEK----VLNSIKEMNPKIVTIVEQEANHNGGVFLERFNEALHYYSTIFDSLeSSGVTQGNsTENLVMTEVYLGRQ 448
                 999***************88888888....*********************************************66666666559999********** PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 i+nvvacegaer+erhetl +Wr+r+++aGF+pv+l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaWr
  PIN23674.1 449 ICNVVACEGAERVERHETLPQWRRRMSSAGFHPVHLGSNAFKQASMLLALFAgGDGYRVEENDGCLMLGWQTRPLIATSAWR 530
                 *********************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    
MKRDRDLGKT EAVADGGSAS PGKAMMWAAE PPDAGVDELF AVLGYKVKSS DMAEVAEKLE  60
QLEMAMVTKM EDGASALSND TVHYNPSDLP GWVESMLSEF GNFGGFSGES SSNLIFPNDD  120
LRAIPGGAIF SNNKQSDNKR MKSSSPSAAP PPRPVVVDSQ EAGVRLVHTL MACAEAVQQD  180
NMKLADALVK HIGILAVSQV GAMRKVATYF AEALARKIYK IYPQDALETS YSDVLQMHFY  240
ETAPYLKFAH FTANQAILEA FGGANRVHVI DFSLKQGMQW PALMQALALR PGGPPAFRLT  300
GIGPPQADNS DALQQVGWKL AQFAETIGVE FEFRGFVASS LAHIDAKMLE TGPGNSEAVA  360
VNSVFELHCL LSMPGGIEKV LNSIKEMNPK IVTIVEQEAN HNGGVFLERF NEALHYYSTI  420
FDSLESSGVT QGNSTENLVM TEVYLGRQIC NVVACEGAER VERHETLPQW RRRMSSAGFH  480
PVHLGSNAFK QASMLLALFA GGDGYRVEEN DGCLMLGWQT RPLIATSAWR LTASE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein