PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23696.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 198aa MW: 22930.1 Da PI: 8.3124

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23696.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	34	53	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ PIN23696.1 34 FSCSVCSKTFNRYNNMQMHM 53 89*****************9 PP
2	zf-C2H2	14.6	9.3e-05	119	141	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F + + ++H +++ PIN23696.1 119 FGCRKCGKPFAVRGDWRTHEKNC 141 56*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MVASTHLMLV PVLNLLGSPL LPHCHREEQR PTQFSCSVCS KTFNRYNNMQ MHMWGHGSEY 60 RKGPESLRGT KPASSILRLP CYCCAEGCKN NIEHPRSKPL KDFRTLQTHY KRKHGTKPFG 120 CRKCGKPFAV RGDWRTHEKN CGKLWFCICG SDFKHKRSLK DHVRAFGQGH APHSENLYSY 180 DHVEVEDLEE EEEEEEES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-96	C2H2 family protein