PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23777.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 456aa MW: 50461.5 Da PI: 8.6274

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	66.5	3.6e-21	136	179	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDG+kWRCs++v+ +k+CErH+hrgr+ srk++e PIN23777.1 136 DPEPGRCRRTDGRKWRCSKNVVLHQKYCERHMHRGRQGSRKHVE 179 79****************************************98 PP
2	WRC	61.3	1.5e-19	343	379	2	38
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsr 38 +ep rCrRtDGKkW C+r++++++k+CE H+hrg +r PIN23777.1 343 TEPQRCRRTDGKKWQCRRDAVPNQKYCEAHMHRGAKR 379 79********************************998 PP
3	QLQ	29.6	2.1e-11	69	103	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FT+aQ++++ sQil++ + +++ vP +L ++i+ PIN23777.1 69 LFTDAQFHEFYSQILVFNSITSGLAVPFHLFLPIW 103 6*********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MLSQLLPLIA NEGLPGNEDE CGHGLLAAEK REDFSEKINL DLGIGSFALE NEGALKRNKK 60 IKEEKEEPLF TDAQFHEFYS QILVFNSITS GLAVPFHLFL PIWMSVFNSL GPAIYLKYPS 120 FVGFSPQNRD HSSIMDPEPG RCRRTDGRKW RCSKNVVLHQ KYCERHMHRG RQGSRKHVEH 180 VQSVSRSDNK TCRDSKMPII SSVTANADNR IPTANRSVDP GQPCSNYSNS VPAIAVYRND 240 KSHDAFLPIQ NTLNKYTLGC EVNKNKNVGC VATSTCGNSM NNGATDGCSH TEGRVPGFEN 300 ANPRKISIRN GVAMRFGSSP KSVLHCGAGK VDLVSRSTNV TETEPQRCRR TDGKKWQCRR 360 DAVPNQKYCE AHMHRGAKRL RLNAESAGDV PDTSARKAHT SFTGTRSLDN GINLNDIPAS 420 PQRTFTGDDS TSSTSDATTI TDENISFCLT QSLHNC

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MLSQLLPLIA NEGLPGNEDE CGHGLLAAEK REDFSEKINL DLGIGSFALE NEGALKRNKK  60
IKEEKEEPLF TDAQFHEFYS QILVFNSITS GLAVPFHLFL PIWMSVFNSL GPAIYLKYPS  120
FVGFSPQNRD HSSIMDPEPG RCRRTDGRKW RCSKNVVLHQ KYCERHMHRG RQGSRKHVEH  180
VQSVSRSDNK TCRDSKMPII SSVTANADNR IPTANRSVDP GQPCSNYSNS VPAIAVYRND  240
KSHDAFLPIQ NTLNKYTLGC EVNKNKNVGC VATSTCGNSM NNGATDGCSH TEGRVPGFEN  300
ANPRKISIRN GVAMRFGSSP KSVLHCGAGK VDLVSRSTNV TETEPQRCRR TDGKKWQCRR  360
DAVPNQKYCE AHMHRGAKRL RLNAESAGDV PDTSARKAHT SFTGTRSLDN GINLNDIPAS  420
PQRTFTGDDS TSSTSDATTI TDENISFCLT QSLHNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45480.1	1e-37	GRF family protein