PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23825.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 319aa    MW: 35661.2 Da    PI: 7.1106
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.58.3e-201461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd++l  +++q+G+++W++I+++ g+ R++k+c++rw +yl
       PIN23825.1 14 RGQWTPEEDQKLSSYIAQHGTRNWRLIPKHAGLQRCGKSCRLRWTNYL 61
                     89********************************************97 PP
2Myb_DNA-binding46.11.1e-1468110246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++ E++ +v ++  lG++ W+ Ia+ ++ gRt++++k++w++
       PIN23825.1  68 GQFSEAEEQTIVTLHSVLGNR-WSVIASQLP-GRTDNDVKNHWNT 110
                      789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MGRIPCCEKD NVKRGQWTPE EDQKLSSYIA QHGTRNWRLI PKHAGLQRCG KSCRLRWTNY  60
LRPDLKHGQF SEAEEQTIVT LHSVLGNRWS VIASQLPGRT DNDVKNHWNT KLKKKLSGMG  120
IDPVTHKPFS HLITEIATLP PPQAPNLAEA ALGCFKDEML HLLTKRRIDL QLQQFGTTPP  180
NTNTCTEHQE DKDETIEKIK FGLSKAIKDP DMLPINKPWE PVGAPSANHI GASFSPLPGP  240
DSGFHYGLTS LGNDGELSPW SQSMCTGSTC TARDQQGCLH DEQGDDSSGR KEARNKSNIF  300
NSDYSLWDLP SDDLMNPMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.11e-113MYB family protein