PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23858.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 249aa    MW: 28564.5 Da    PI: 7.8745
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23858.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.82.2e-14127226197
                 EEEE-..-HH.HHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdv.lksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+l+ sd+ lk++rl++pk++ae++    +     +  ++++d++g++We+ ++y+  +g+  yvl+ G +++  +++ + g +v+F+ ++  +++ 
  PIN23858.1 127 FEKILSASDAdLKLARLIIPKRCAEAFfpdlS--GLHGLHIKMQDTEGNEWEFHYQYWIIGGSriYVLE-GLRDYMVSKQWQPGNTVTFYGVE-PGGKV 221
                 89999999972466***************652..445678*****************665555558888.********************544.55555 PP

                 EEEEE CS
          B3  93 vvkvf 97 
                 v++++
  PIN23858.1 222 VMGLR 226
                 55554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MASSSRMSCF QCQDSSSKPD RFRNGWRLHS GHSVYEEGRF CETFHSNDDG WRDCESCGKL  60
VHCGCIVSFN THLLLDFGGI ICMECSRFNF LLARNRYLSL EREIRDRESY QEASGQADPK  120
STVTPLFEKI LSASDADLKL ARLIIPKRCA EAFFPDLSGL HGLHIKMQDT EGNEWEFHYQ  180
YWIIGGSRIY VLEGLRDYMV SKQWQPGNTV TFYGVEPGGK VVMGLRKTFA SPQLPRVVWQ  240
KQFKTSCKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.12e-32B3 family protein