PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23899.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 226aa    MW: 25036.9 Da    PI: 8.7446
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23899.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.9e-203078355
         AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++ a+++l+g
  PIN23899.1 30 FRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDSAEDAARAYDTAARSLRG 78
                8*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MRRGRAAGRQ VAAVQGGEAN GSGGSKEIRF RGVRKRPWGR YAAEIRDPWK KTRVWLGTFD  60
SAEDAARAYD TAARSLRGPK AKTNFPLPPG NVFPDFNPQN PNQRQINHNP NDPLMDSRYY  120
SQDQQIIAQQ RPTSSGMSST VESFSGPRQL PPPQQIMQQR RHPRSPPIVP DDCRSDCDSS  180
SSVIDDAECD IASSSCKKAL LFDLNMPPPL DDATDLDELA CTALRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-41ERF family protein