PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23914.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

DBB

Protein Properties

Length: 317aa MW: 35251.4 Da PI: 6.4978

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.1	6.4e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ e++ fC ++ lC+ C + H+ H+ PIN23914.1 4 HCDVCDKDEASVFCIADEAALCAACDQRVHHAnklagkHQ 43 7****99******************74446676776 PP
2	zf-B_box	27.9	5e-09	53	92	1	38
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 ++++ C+ ++e ++ lfC++++ lC++C +Hk Ht PIN23914.1 53 NQAPLCDICQERRAFLFCQQDRAILCRECDIPIHKAneHT 92 57899*****************************878854 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MKIHCDVCDK DEASVFCIAD EAALCAACDQ RVHHANKLAG KHQRYSLHHP SPNQAPLCDI 60 CQERRAFLFC QQDRAILCRE CDIPIHKANE HTQKHTRFLL TGVKLSASSA LYSSSLESAK 120 QISDVVPKII KSQDSKDNKP LLFPPVNTPS TSKTTTLPSP ESCEKSTNSQ LMNGGNSSNG 180 SISGSSISEY LIEMLPGWHV EDLLDSSFPS TYGFCKNGDD DVIPFWDADL ESNINAFPTE 240 NMRFWVPQVP PPLNQTQNQS SQSMDFAFGA PNGNKEQFKE FSSNNIKSSR KWNEDSSFVV 300 PQISPPFSSS KRSRTSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	2e-56	DBB family protein