PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23941.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NF-YB

Protein Properties

Length: 140aa MW: 15627.4 Da PI: 6.7675

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23941.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	143	7.3e-45	3	98	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 e+d++lPianv+rimk++lP +akisk+ake +qec+sefisfvtseasd+c++ +rkt+ngdd++ al++lG+++y e++ yl+k r+ e+++ PIN23941.1 3 DEHDKLLPIANVGRIMKQILPPHAKISKEAKERMQECASEFISFVTSEASDRCRKGNRKTVNGDDICSALSSLGLDNYSEAMLRYLQKLRQSERQR 98 589****************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 140 aa Download sequence
MTDEHDKLLP IANVGRIMKQ ILPPHAKISK EAKERMQECA SEFISFVTSE ASDRCRKGNR 60 KTVNGDDICS ALSSLGLDNY SEAMLRYLQK LRQSERQRAN QSNQVCISED KDEASTTNSV 120 PSFDFGILDR GGSTSSDRHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09030.1	3e-49	NF-YB family protein