PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23943.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YB
Protein Properties Length: 139aa    MW: 15839.7 Da    PI: 6.2607
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB148.51.4e-46398297
       NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                 e+d++lPianv+rimk++lP +akisk+ake +qec+sefisf+tseasd+c++e+rkt+ngdd++wal+++G+++y +++  yl+k re e+++
  PIN23943.1  3 DEHDKLLPIANVGRIMKQILPPHAKISKEAKERMQECASEFISFITSEASDRCHKENRKTLNGDDICWALCSVGLDNYSDAMLRYLQKLREYERQR 98
                589******************************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MTDEHDKLLP IANVGRIMKQ ILPPHAKISK EAKERMQECA SEFISFITSE ASDRCHKENR  60
KTLNGDDICW ALCSVGLDNY SDAMLRYLQK LREYERQRAY QSNLVSTGED KDETSTTNWA  120
TFDFGILDRR GSTSSGKPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.12e-51NF-YB family protein