PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24027.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 159aa    MW: 17331.4 Da    PI: 9.5962
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-172675255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  PIN24027.1 26 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVYYLRG 75
                69*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MEGGGGGATA GAGATRAVSQ RRSDKPYKGI RMRKWGKWVA EIREPNKRSR IWLGSYSTPV  60
AAARAYDTAV YYLRGPNAKL NFPDEISTGS GLEDLSPASI RQKAAEVGAR VDALHTSTLA  120
VAAHGDHAMI NHESMKTSWF QDKIDLNKKP EPEDLDEYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.11e-53ERF family protein