PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24079.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 381aa MW: 43342.7 Da PI: 7.1893

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.7	4.5e-53	18	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 + pGfrFhPtdeelv +yL++k+++k+l++ e ik++diyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s++++ PIN24079.1 18 MLPGFRFHPTDEELVGFYLRRKIQQKPLSI-ELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSTRPNRVTWAGFWKATGTDRPIYSEGSKC 115 579*************************.89***********8888999**************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfykgra kg ktdW+mhe+rl PIN24079.1 116 IGLKKSLVFYKGRAAKGIKTDWMMHEFRL 144 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEERLVENDK SSTTDEVMLP GFRFHPTDEE LVGFYLRRKI QQKPLSIELI KQLDIYKYDP 60 WDLPKLATTG EKEWYFYCPR DRKYRNSTRP NRVTWAGFWK ATGTDRPIYS EGSKCIGLKK 120 SLVFYKGRAA KGIKTDWMMH EFRLPSVSDS VSSKKYLDKS IPPNEAWAIC RIFKKPNSST 180 QRTLTHSWVS PPFNHITTSN TTNPSSITNL HFNSTNLITT ANKTSSPLQF SFCNNIEQSS 240 IASFSPMKPF HQMYTDTPDS APPKRAINDA SSLLLDMSTS ILGESVRGSD NLDFSTLLDN 300 GFSTENVQEN LCHSEEGVLE KDQNAGELLD DQWGMMKSMG YYPYGFPFSL ADAWRPNLAW 360 DSPSPCPSEL STGYSTNKCH T

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEERLVENDK SSTTDEVMLP GFRFHPTDEE LVGFYLRRKI QQKPLSIELI KQLDIYKYDP  60
WDLPKLATTG EKEWYFYCPR DRKYRNSTRP NRVTWAGFWK ATGTDRPIYS EGSKCIGLKK  120
SLVFYKGRAA KGIKTDWMMH EFRLPSVSDS VSSKKYLDKS IPPNEAWAIC RIFKKPNSST  180
QRTLTHSWVS PPFNHITTSN TTNPSSITNL HFNSTNLITT ANKTSSPLQF SFCNNIEQSS  240
IASFSPMKPF HQMYTDTPDS APPKRAINDA SSLLLDMSTS ILGESVRGSD NLDFSTLLDN  300
GFSTENVQEN LCHSEEGVLE KDQNAGELLD DQWGMMKSMG YYPYGFPFSL ADAWRPNLAW  360
DSPSPCPSEL STGYSTNKCH T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-100	NAC family protein