PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24087.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 330aa MW: 34821.6 Da PI: 9.3134

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24087.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.8	3.2e-41	52	187	2	124
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ PIN24087.1 52 QVKRSSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISVRSSGSTLSAPshlrnfsylnq 150 5799*****************************************************************999878888888887777754444444433 PP TCP 89 .kaaksaakskksqksaasalnlakesr...........akararare 124 s+ +al++++ + + + + ar+ PIN24087.1 151 sF-----------GPSDYNALSFSNVNNamlqakqemvaEGETSMARK 187 20...........22333344444444422222222222233333444 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MDGLNGSNPM QKPNYFPLQL LEKTDHHEEP ASSTSNIAIN NSSQQQSNKK PQVKRSSTKD 60 RHTKVDGRGR RIRMPATCAA RVFQLTRELG HKSDGETIEW LLQQAEPAVI AATGTGTIPA 120 NFTSLNISVR SSGSTLSAPS HLRNFSYLNQ SFGPSDYNAL SFSNVNNAML QAKQEMVAEG 180 ETSMARKRRQ EEDLAPPTPS AAAAYMLQSS AGAIPASQGQ YPATNPVTSG DSLWAFSSIG 240 NSSMYRGSSV GNNGLHFMNI PTSMAYLQGQ QLVMGNGGGG GSVTAVDGHL GMLAALSAFR 300 PISGTGAADA QDGGHGGAGR DRHVATSHNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	3e-50	TCP family protein