PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24098.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 230aa    MW: 25420.4 Da    PI: 4.5035
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY52.97.1e-1721592259
                EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                r+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  PIN24098.1 21 RGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 59
                99*****998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MISLVNKKVN SSFVARVYEY RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW  60
PTQRNALAGS TRSQPSKTTN NTSKTSPNSQ AQKPTNPKEE KNEISTENAV TSSSTNSAAV  120
KEETDQDFDN QLENMDDAEF NEGFPQTYKP TLPDSNHTED NFFADLGEIE GDPLDLLFIQ  180
GFSGDVGREN KDLDPFSFYD WAANTSNITS AATTTTTASS AASYGDATRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.13e-40WRKY family protein