PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24153.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 251aa    MW: 28410.7 Da    PI: 5.9614
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-1969117355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+G+r+++ +g+W+AeIrdp++     r++lg++ taeeAa+a+++ +++++g
  PIN24153.1  69 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTYNTAEEAARAYDREARRIRG 117
                 9*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MCGGAIIQGL IPRRRVASGD LCPTSADFWP AAFSSFEQNS TPVKRPRSSS GEECAEKNVA  60
KKKQRKNLYR GIRQRPWGKW AAEIRDPRKG VRVWLGTYNT AEEAARAYDR EARRIRGKKA  120
KVNFPNEEVD YSYNCNPKPG KPYKTEHFNE FNHVELGPAY ENQIYPVNNG GESKPEVNGN  180
VENCKETAVE YETAENEVQK LSEELMAYEN YMKFYQIPYL DGESAAAPAN PPPETVDLWS  240
FDEVSGELSV V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.11e-36ERF family protein