PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24189.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 326aa    MW: 35973.7 Da    PI: 6.6391
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24189.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.18.9e-17217251135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  PIN24189.1 217 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 251
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MEYFARDYAE FSSEDIGNFN NNNISNNNGV HFTVDDLLDF PKEDETMTDA FLDSLKGNSG  60
DSSTVTAVDS CNSSVSGGVD GQFSGNVSCR SFNESQFSGN ELCVPYDDLA ELEWLSNFVE  120
ESFSTDDLRF IPTNNAAAAA KTAATDTSSS ATTTHSPPTL PIFPSDVSVP GKARSKRSRA  180
APCDWSSRLL LLSPTSNAKT TPPPKNREPT ETPGRKCLHC ASEKTPQWRT GPMGPKTLCN  240
ACGVRYKSGR LVPEYRPAAS PTFVSTKHSN SHRKVMELRR QKELQRQHQQ HHHQQLINQA  300
SIFNGCDEFL IHHRSSINGP DLRHMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.16e-67GATA family protein