PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24350.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 168aa    MW: 19327.5 Da    PI: 5.7019
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.74.2e-16243548
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     T+ E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++
       PIN24350.1  2 TPHEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 43
                     9*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MTPHEERLVL ELHSKWGNRW SRIARKLPGR TDNEIKNYWR THMRKKAQER KKAITPSSSS  60
SNSSSSSSIS NSPTEGRSFY DTGGMDTAPS PGENKAGVEV EECTKVYSMD EIWKDIELSE  120
EICQTLSSPR MNFCPNESLW SIDEEEIKML MQQMGDNFHS FPFYNYTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.21e-35MYB_related family protein