PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24472.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 395aa MW: 44235.5 Da PI: 4.9061

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24472.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.2	1.1e-51	24	151	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv +yL++k+ gk++++ ++++e+d+yk+ePw+L +++k+++ ewyfFs+ d+ky +g+r nrat +gyWkatgkd+ v + k+ PIN24472.1 24 LAPGFRFHPTDEELVRYYLRRKACGKPFRF-QAVTEIDVYKSEPWELAdySSLKSRDLEWYFFSPVDRKYGNGSRLNRATGKGYWKATGKDRGVRH-KD 120 579***********************99.88**********84347777888**********************************.89 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLvf++grap+g++t+Wvmheyrl PIN24472.1 121 QTIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 151 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MGQEVVVAAV GTAAGVGAPP PTSLAPGFRF HPTDEELVRY YLRRKACGKP FRFQAVTEID 60 VYKSEPWELA DYSSLKSRDL EWYFFSPVDR KYGNGSRLNR ATGKGYWKAT GKDRGVRHKD 120 QTIGMKKTLV FHSGRAPDGK RTNWVMHEYR LCDSELERAG VSQDAFVLCR IFQKSGLGPP 180 NGDRYAPFVE EEWDEDAGLI VPGGDAEDDV ANGDEARVEC TDVDQETQQL TMAPPQIDNP 240 IGSNGLPFIC KRERSEEEPE PLSLAQAKRS KNDDPNSSHA NGSEDSTTTS QDPPTMTMTT 300 NFSSALLEFP LLQPLEPKEN HAVNPLTFDS SNLEKSVPPG YLKFISNLEN EILNVSMERE 360 TLKIEVMRAQ AMINILQSRI DILTKENEDL RRHHV

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MGQEVVVAAV GTAAGVGAPP PTSLAPGFRF HPTDEELVRY YLRRKACGKP FRFQAVTEID  60
VYKSEPWELA DYSSLKSRDL EWYFFSPVDR KYGNGSRLNR ATGKGYWKAT GKDRGVRHKD  120
QTIGMKKTLV FHSGRAPDGK RTNWVMHEYR LCDSELERAG VSQDAFVLCR IFQKSGLGPP  180
NGDRYAPFVE EEWDEDAGLI VPGGDAEDDV ANGDEARVEC TDVDQETQQL TMAPPQIDNP  240
IGSNGLPFIC KRERSEEEPE PLSLAQAKRS KNDDPNSSHA NGSEDSTTTS QDPPTMTMTT  300
NFSSALLEFP LLQPLEPKEN HAVNPLTFDS SNLEKSVPPG YLKFISNLEN EILNVSMERE  360
TLKIEVMRAQ AMINILQSRI DILTKENEDL RRHHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.2	1e-96	NAC family protein