PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24497.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ZF-HD
Protein Properties Length: 332aa    MW: 35974.9 Da    PI: 7.4105
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer111.93.4e-3551108359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                   v+YkeClkNhAas+GghavDGCgEfmps+ ++ +++++lkCaACgCHRnFHRre+ee
   PIN24497.1  51 VVTYKECLKNHAASIGGHAVDGCGEFMPSPASNpAEPTSLKCAACGCHRNFHRREPEE 108
                  589****************************999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MDLGNSTVKT PEAETETPTR VQPSKASPFT NGVLKRHAPL HLHHHSHHPV VVTYKECLKN  60
HAASIGGHAV DGCGEFMPSP ASNPAEPTSL KCAACGCHRN FHRREPEEPP LLPPPNATAT  120
LEYQPHHRHH PPPPPQNGGS PNNSPSPPPI SSSFYPSAPH MLLALSHGLS GPPPDNNTPI  180
STAINTTSMP VLNSSSRKRF RTKFTQYQKE KMLEFAERVG WKMQKRDEDI INDFCSEVGV  240
DKGVFKVWMH NNKNTFGKKD QPPQLSNNST AVPAPPATNS TNGNGINYNS IGGDGAAFDH  300
QHEGDSDIKE NVHGEEMSQH HGLGTNGSSS SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.13e-70ZF-HD family protein