PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24568.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 236aa MW: 26638.3 Da PI: 9.0734

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.7	4.9e-35	23	114	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y ++ed++++ +isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv ++ weF+++ F+kgkke l ki+ PIN24568.1 23 FLLKTYALVEDPATDGVISWNSDGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFHKVAANR---------WEFSNDMFHKGKKEVLYKIR 110 9**************************************************************998.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PIN24568.1 111 RRKA 114 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MILECESENG LLEYVRKASP PPFLLKTYAL VEDPATDGVI SWNSDGTAFV VWQPAEFARD 60 LLPTLFKHSN FSSFVRQLNT YGFHKVAANR WEFSNDMFHK GKKEVLYKIR RRKAWSHKPQ 120 PNPQAGSIPK DQSDNEDQRS SSIASSSEFT TLIDENKKLK LKNGALNSEL ATMKKKCKEL 180 LDLVAIYGGN LEKEESVEEE NNEGPKLFGV RLGIGKKRKR EGINEGATLI LSQSCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41690.1	1e-62	HSF family protein