PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24577.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 247aa MW: 28567.5 Da PI: 6.6322

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.4	2.9e-32	28	146	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 p G+rF+Ptdeelv +yL++k+++ +l+ + i+evd+yk+ P+dL + +k++e+ wyfF++ ++++ + gyWkat d +v+s + PIN24577.1 28 PLGIRFRPTDEELVGYYLTRKIKNLELPPLTRIREVDLYKFaTPNDLAEryvLIKERERGWYFFTPGKSNH----------SGGYWKATAGDAPVYS-R 115 89**********************999899****878844556777889**976543..........48**********.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 g+ +g kktL fy+g + +kt+W+mhe+r+ PIN24577.1 116 GHIIGQKKTLCFYQGAKLA-KKTNWIMHEFRI 146 99*******887665.8*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MAGITVDSVM YKEDGQLMNE EEYIRSFPLG IRFRPTDEEL VGYYLTRKIK NLELPPLTRI 60 REVDLYKFAT PNDLAERYVL IKERERGWYF FTPGKSNHSG GYWKATAGDA PVYSRGHIIG 120 QKKTLCFYQG AKLAKKTNWI MHEFRINNEI WVLCKVFERN VGSNTTTSQR ATAEDFPNHA 180 TEEQQQNEEV LAAIVPAVVT NNANELQQPI ILEQNQEFLE STVHPCLIME INHYNRLIKT 240 HLSPILT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	7e-32	NAC family protein