PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24613.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Nin-like

Protein Properties

Length: 828aa MW: 92499.8 Da PI: 5.4555

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.6	2.5e-28	551	602	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+ +kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ PIN24613.1 551 AEKHVSLSVLQQYFSGCLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 602 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 828 aa Download sequence
MDYPFWSKEK GNDSLAFPRG WVEGMGVFSM NNGLWSTNLD DLSCNVVELM NLDAYAGWCN 60 TPCTLSDQMY PPFALFPLIA TSTTFSPFDG LNFTDQYHSV VDSDIIGSSF SNGDKVMLPQ 120 GDNLKNSTVD RVNSILRFSM HSLAERMLKA LFLFMEWSGG GILAQVWVPM KNGDRYILST 180 SEQPYLLDQT LSGYREVSRL FTFAAESKPG FFLGLPGRVF TTKLPEWTSN VMYYSKAEYL 240 RVQYAVDHKV RGSIALPVFD DDSLETSCCA VLELVTMKEM SDFDLEMENV CRALQSLSEN 300 QRAALAEITD VLRAVCHAHR LPLALTWIPC NYSDGETIRM SSGGCITSRN EKFVLYIEDA 360 ACYVNDENMH GFVHACTKHY LEEGQAFQFN RPFFYPDVKE YHISEYPLVH HARKFGLNAA 420 FAIRLRSTYT CESDYILELF LPVDMRGSVE QHVLLNNLSS AMQRICKSLR TVSDAELLRT 480 EDSKVELKNM LPISLSRRNS EQSLADGDFS YVGRLLQSVS ESTNKEVEAD CAHEQSILGS 540 RKPMEKKRST AEKHVSLSVL QQYFSGCLKD AAKSIGVCPT TLKRICRQHG ISRWPSRKIN 600 KVNLSLRKIQ SVLNSVEGVE GGLKFDPAVG GLVAAGSIIQ ELDLRKDFTL ANKSSSIGNS 660 DSIVPNAKSH MENEWASEFR PISRSSSSVA ASDGMVTGSK DDIGIVDGLV ECNQPISSGM 720 ADSYTGFGSR SMTNGCSSSS RNLQYPRAET KYGYIQLYEE IASRFNLLIG QFQLKYLDDE 780 NEWVMMVSDS DLHECIEMLN FPGTRTLKFI VRDVHSAVGS SSGSSGFF

Sequence ? help Back to Top

Protein Sequence Length: 828 aa Download sequence

MDYPFWSKEK GNDSLAFPRG WVEGMGVFSM NNGLWSTNLD DLSCNVVELM NLDAYAGWCN  60
TPCTLSDQMY PPFALFPLIA TSTTFSPFDG LNFTDQYHSV VDSDIIGSSF SNGDKVMLPQ  120
GDNLKNSTVD RVNSILRFSM HSLAERMLKA LFLFMEWSGG GILAQVWVPM KNGDRYILST  180
SEQPYLLDQT LSGYREVSRL FTFAAESKPG FFLGLPGRVF TTKLPEWTSN VMYYSKAEYL  240
RVQYAVDHKV RGSIALPVFD DDSLETSCCA VLELVTMKEM SDFDLEMENV CRALQSLSEN  300
QRAALAEITD VLRAVCHAHR LPLALTWIPC NYSDGETIRM SSGGCITSRN EKFVLYIEDA  360
ACYVNDENMH GFVHACTKHY LEEGQAFQFN RPFFYPDVKE YHISEYPLVH HARKFGLNAA  420
FAIRLRSTYT CESDYILELF LPVDMRGSVE QHVLLNNLSS AMQRICKSLR TVSDAELLRT  480
EDSKVELKNM LPISLSRRNS EQSLADGDFS YVGRLLQSVS ESTNKEVEAD CAHEQSILGS  540
RKPMEKKRST AEKHVSLSVL QQYFSGCLKD AAKSIGVCPT TLKRICRQHG ISRWPSRKIN  600
KVNLSLRKIQ SVLNSVEGVE GGLKFDPAVG GLVAAGSIIQ ELDLRKDFTL ANKSSSIGNS  660
DSIVPNAKSH MENEWASEFR PISRSSSSVA ASDGMVTGSK DDIGIVDGLV ECNQPISSGM  720
ADSYTGFGSR SMTNGCSSSS RNLQYPRAET KYGYIQLYEE IASRFNLLIG QFQLKYLDDE  780
NEWVMMVSDS DLHECIEMLN FPGTRTLKFI VRDVHSAVGS SSGSSGFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein