PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24638.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 356aa    MW: 39317.4 Da    PI: 4.8858
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52e-12186231555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h ++Er+RR+++ ++f  L +++P +     kK++K ++L  A++Y+k+Lq
  PIN24638.1 186 HIIAERKRREQLSQRFVALSTIVPGL-----KKMDKTSVLGDAIKYLKHLQ 231
                 899***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MDSSEMSWLS EMGLDNSIFM DQCDFMDSFD EEVAAVLGQD FENCLSAGNN SSSSSTLINI  60
PSTNSINSLC TNSPPTDTNM ASEPPAKLQK PNNFSNFSTI QTLPNPDRAS SAPIILNFGN  120
STEINPQQMV NPSRPLNPDE EAAVSEVLRS QGSFVEPEEQ SKRAPATTTT TKKTSRVRPP  180
SQTYDHIIAE RKRREQLSQR FVALSTIVPG LKKMDKTSVL GDAIKYLKHL QERVKTLEEQ  240
ATKQTMESVV LVKKSQIMVE DEGSSDEKSG SSDEQPLPEI EARVCNNHIL LRVHCEKRKG  300
VLVNLLSRVE KLGLSVVNTN VTPFGSLALD ITIVAEMEKE FDLSVKEVVK RLRAAL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190195ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-53bHLH family protein