PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24652.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 195aa    MW: 21442.3 Da    PI: 4.4476
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-181565155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++y GVr++k +g+Wv+eIr+p   gk++r++lg++  +++Aa+a++ a+++l+g
  PIN24652.1 15 PQYIGVRRRK-WGKWVSEIREP---GKKTRIWLGSYEEPQMAAAAYDVAALCLKG 65
                689****998.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MKEQVAAGCN INSAPQYIGV RRRKWGKWVS EIREPGKKTR IWLGSYEEPQ MAAAAYDVAA  60
LCLKGPTGAR LNFPELVDSL PKPVSSNAED IQLAANQAAM QLRTQRPKEE EEEDRGGDGS  120
IARATGMLPA AVRVGLSPTQ IQAINESPLD SPKMWMELAG PSVSLVGSEP LFYCGETDEI  180
ELQWDAMECN YSIWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.14e-43ERF family protein