PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24728.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 326aa    MW: 35779.1 Da    PI: 7.1629
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.4e-21158208256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r r +lg+f+taeeAa a+++a+ kl+ge
  PIN24728.1 158 LYRGVRQRH-WGKWVAEIRLPKN---RSRLWLGTFDTAEEAALAYDKAAYKLRGE 208
                 59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MATTMDFCSK PVADPFMGGE LMEALEPFMK SASSTPLSSS STLPSSSSSS SSSLSPVPSP  60
SSFPLTSDQY FSVTANPSPS DYYYCPPSQF EPNMYQIPAH EFSFGPVPFS PAQIYGAQAH  120
MVSSSVQSQC QPRQTTHFLG LKPVSMKQTG SPPKPTKLYR GVRQRHWGKW VAEIRLPKNR  180
SRLWLGTFDT AEEAALAYDK AAYKLRGEFA RLNFPHLRHS GSLIGGEFGE YKPLHASVDA  240
KLQAICQTLA EGKSIDAQKC KKSRSKKATP APSQPGEQEQ DKNYKMGEPE SDGSGGLSPM  300
SEPNFAEFGW ESLQDFPSYE IDWANL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-59ERF family protein